BNFO 300 
Molecular Biology Through Discovery
Topic: Semester Research Project
Fall 2019 

Rationale
Just as it is insane to learn music by stopping up your ears and memorizing key signatures, it is equally insane to learn science without doing science. While the entire course is built around doing science, the most complete realization of that goal will be through the semester project, which comes in two forms. Most of you will create a research proposal, a justification and outline of an experiment that can move human knowledge forward concerning how something works at the molecular level. Some who are particularly motivated towards communication may choose an alternative, more difficult path, translating a research article into accessible language. These options are explained further here. Either option entails forging a relationship with someone in the research community who will serve as your mentor.

Readings and Descriptions
    Description: How to find and interact with a mentor for the proposal
            There are effective ways and some common but very ineffective ways.
    Description: How to create a focused bibliography
                          Listing of methods in an article to translate (how to do it)       Examples: #1 and #2
    Description: Summary of an experiment from a research article -- Why and how
            The summary is like a mini research proposal. The goals and format are the same.
    Description: How to critique the work of others
            You'll be critiquing the summaries of your colleagues.
    Description: Research proposal outline (how to do it)       Here's an example
                          Article translation site map (how to do it)       Here's an example
    Description: Research proposal outline (how to do it)       Here's an example
                          Article translation site map (how to do it)       Here's an example
    Description: (Article translation) How to create a website and contents (templates)
                          Here's an example of a completed translation
    Description: How to give a presentation (7 minutes max)
            Similar message as a presentation (courtesy of Kristen Wade)
            Here's an example and here's another (I didn't say good example)
            (neither one fits the description of what's needed for the panel, but perhaps you might find some use in them)
    Description: How to prepare for a panel.
            You'll be presenting your work to a panel and serving on a panel to assess the work of others.

Things to do and hand in
Find a mentor
    30 Aug: Submit name of a candidate mentor plus a pertinent research article (part of Problem Set 1)
      2 Sep: Thoughts on finding a mentor
      6 Sep: Obtain agreement from VCU faculty member to serve as mentor

Intermediate steps        
    Research proposal   Article translation
16 Sep: Bibliography of focused topic (1st draft)   Submit article + listing of methods (examples: #1 and #2)
 25 Sep: Submit article/experiment to present Oct 1   Submit article/experiment to present Oct 1
 1 Oct: Presentation of experiment   Presentation of experiment
  7 Oct: Bibliography of focused topic   Submit article + listing of methods (examples #1 and #2)
21 Oct: Description of proposal   Website map (example)
28 Oct: Summary of experiment from a research article   Summary of experiment from chosen article
  4 Nov: Critiques of others' summaries of experiments   Critiques of others' summaries of experiments
11 Nov: Outline of proposal   Create a website; Detailed site map with figures

Final steps
    1 Dec (9am): Submission of draft of research proposal or post article translation web site (Inflexible deadline!)
    3,5 Dec: Mock panel: 7 min presentations and discussions of semester projects (schedule)
      8 Dec (9am): Submission of final research proposal or article translation web site (Inflexible deadline!)
    10-13 Dec: Panel consideration of semester projects (schedule)
    15 Dec: Optional revisions of final version of research proposals or article translation web site due.

Presentations
   
List of presentations (provisional)
    Schedule of mock presentations
    Schedule of presentations
    Proposals and presentations from previous years:
        2018,   2017 (fall),   2017 (spring),   2016,   2014,   2013,   2012