I. Basic Information
A. Your name
II. Old Business
- Any final concerns about
Search for FMRP?
- Any final concerns about
Gene Regulation and Bacteriophages?
(e.g.
- What is lysogeny and how is the Repressor involved in achieving it?
- How does the lambda Repressor and Cro protein act on the regulatory region upstream from the cI and cro genes?
- How are regulatory feedback loops achieved?
III. Search for Regulatory Sequences
- How far did you get in the tour
Search for Regulatory Sequences?
- Do you understand the different search methods (exact match, pattern match,
COUNTS-OF-K-MERS) and why they give different results?
- Do you understand how MOTIFS-IN works and how its related to PSSMs?
- Do you understand the output of MOTIFS-IN?
- Were you able to find the lambda operators using MOTIFS-IN?
- Were you able to find the regulatory sequences of interset to Gomathi et al (2007)?
Do you have any favorite study questions (SQ1-SQ22) you think need discussion?
V. Miscellaneous
Any other comments, questions, suggestions, or concerns you may have?
Thanks!
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