Elhai Research - BioBIKE  
Jeff Elhai - Research
BioBIKE: How is it used in research?

 
  • BioBIKE instances, each devoted to the interests of a specific research community, are available through the BioBIKE portal
     
  • It has been used as an intelligent encyclopedia for different research communities, providing answers to stray questions (e.g. what is the average size of a genes in my favorite organism)
     
  • It has allowed users to pursue questions deeply through the construction of new computational tools. Examples:
  • Ow SY, Cardona L, Taton A, Magnuson A, Lindblad P, Stensjö K, Wright PC (2009). Quantitative Overview of N2 Fixation in Nostoc punctiforme ATCC 29133 through Cellular Enrichments and iTRAQ Shotgun Proteomics. J Proteome Res 8:187-198.

    Elhai J, Kato M, Cousins S, Lindblad P, Costa JL (2008). Very small mobile repeated elements in cyanobacterial genomes. Genome Res 18:1484-1499.

  • It will soon be used by the community of those studying bacteriophage to annotate phage genomes and metagenomes, as described here.