BNFO 301 
Introduction to Bioinformatics
Symposium on Phage Genome Analysis (Preliminary)
April 25, 2013
Spring 2013 

 

Presenter

Presentation*

Reviewers

Sue Parks

Something to do with pinholin

(Kommaraju Khan Thominet)

Lawangin Khan

[Rz/Rz1, LysB/LysC, gp u/v] proteins of lytic cassette

(Figueroa Parks Sharma)

Jonathan Kindberg

Is there a correlation between similar cluster phages’ tandem repeats within the tape measure protein and its location within that gene?

(Garada Figueroa Herbert)

Kristen Wade

Identification and comparison of indirect readout sequences in mycobacteriophage

(Parks Sharma Figueroa)

Sonia Sharma

Locating the repressor binding sites in the bacteriophages

(Abdallah Wade Dahman)

Mandi Feinberg

Integration-dependent bacteriophage immunity provides insights into the evolution of genetic switches

(Khan Pokhrel Teferra)

Firras Garada

Lysis or Lysogeny? Gene Regulation by CI (and CI like) Repressor Proteins

(Waseem Feinberg Kindberg)

Supriya Pokhrel

Structure of repressor protein and how the structure can help understand  the binding to various operators

(Teferra Garada Abdallah)

Swathi Bobbity

Something to do with excisionase

(Dahman Faske Waseem)

Bobby Chaggar

Identifying unclassified mycobacteriophage prophage DNA in mycobacterial genomes

(Herbert Teferra Feinberg)

Yordanos Teferra

attP region and attB regions

(Bobbity Chaggar Khan)

Abdallah Abdel Maksoud

Reverse transcriptase insertions in Bordetella phages

(Chaggar Kommaraju Bobbity)

Farah Dahman

Mobile elements existence in mycobacteriophages

(Pokhrel Thominet Chaggar)

Kavya Kommaraju

Identifying New Motifs in Class 3 Inteins

(Sharma Abdallah Garada)

Sandrine Thominet

Something to do with gene transfer agents

(Hossain Dahman Faske)

Kathy Figueroa

Something to do with domains within tapemeasure protein

(Feinberg Kindberg Parks)

Keith Herbert

Exclusion proteins in mycobacteriophages

(Kindberg Hossain Wade)

Moshraf Hossain

Something to do with internal head protein

(Faske Waseem Kommaraju)

Tayab Waseem

The case of the missing palindromes

(Wade Herbert Pokhrel)


Two minutes per presentation + short (<1 min question/answer period)

*Underlined reviewer facilitates question/answer period. If you are scheduled to review a presentation that is
  canceled, feel free to attach yourself to someone else.