BNFO 301
Introduction to Bioinformatics
Questionnaire on: Tour of Edwards & Rohwer (2005) - Part 3
Nature Rev Microbiol (2005) 3:504-510
(please press SUBMIT button when finished)
Spring 2008

I. Basic Information

A. Your name 
II. Old Business: Edwards & Rohwer (2005) - second part of article
This sections contains the same questions as on Monday's questionnaire.
You can skip them, unless your answers have changed or you haven't previously provided any insights.

A. How comfortable are you with interpretting Figure 2 of the article? 

B. How comfortable are you with the notion of a prophage? 

C. How comfortable are you with the approach described in the notes to estimate the complexity of an environmental sample? 

D. How comfortable are you with the different flavors of Blast? 

E. How comfortable are you with the idea of characterizing genes by their codon usage? 

F. How comfortable are you with the idea of characterizing genes or DNA sequences by their GC content? 

G. Choose study questions that you would most like discussed in class:

SQ1  SQ2  SQ3  SQ4  SQ5  SQ6  SQ7  SQ8  SQ9  SQ10 
SQ11  SQ12  SQ13  SQ14  SQ15  SQ16  SQ17  SQ18 
Comments on
second part
of Edwards & Rohwer
III. General discussion of analysis of unknown sequences
What problems or concepts would you like discussed?
IV. Meta-questions
A. Put here any miscellaneous comments, questions, suggestions, concerns you may have.
    Anything else you'd like discussed?
 

Thanks!

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