A. Were you able to get the article by Samuel Karlin (2001)? Select
B. The main focus of the article -- detection of pathogenic islands -- is not of great concern to us. Nonetheless, were you able to make sense out of the overall biology of the article?
Select
C. How comfortable are you with Figure 1, apart from the nuts and bolts of how the different quantities are calculated? Select
Comments re Karlin (2001):
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A. How comfortable are you with the meaning of G+C fraction? Could you calculate it by hand if you had the time and patience?
B. How comfortable are you calculating GC-FRACTION in BioBIKE?
C. Do you appreciate the desirability of rounding off the fractions calculated by GC-FRACTION-OF?
Select
D. How comfortable are you with the MEANS of rounding off the fractions?
E. How comfortable are you with the calculation of the statistics concerning the GC-fractions?
F. How comfortable are you with using APPLY-FUNCTION to map a generalized function over a list of arguments?
G. How comfortable are you with writing data to a file and finding that file afterwards?
H. How comfortable are you with manipulating the data within Excel?
I. Do you feel you understand why the distribution of GC-fractions change as the fragment size diminishes?
Select
D. Choose up to five study
questions that you would most like discussed in class:
SQ1
SQ2
SQ3
SQ4
SQ5
SQ6
SQ7
SQ8
SQ9
SQ10
SQ11
SQ12
SQ13
SQ14
SQ15
SQ16
SQ17
Comments re
Calculation of GC-fractions: |
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