"DAS" - Transmembrane Prediction server

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Your query is:
MEAIIMTTLPNLTTDAGDSSFWLTGALSLSEMLANSSHSHSTGSTTSTAG
SSATESSAVNVGKDHDKHVNDSVSTGLSNYSNYPSYIHYRDKYDLSYIAK
VNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTP
ANILVMNLAICDFLMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGT
CAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAVMP
ALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCIPLTSIVY
SYFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVA
MMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVRMLFY
GRGVLRRVSTTRSSYMTRSRSSFTHRLRTSTTGEGGMGDHRMENYLMNNN
LMMVPEETEENEEIVVVAEINNSISSVMEQSKF

Potential transmembrane segments
Start	Stop	Length	~	Cutoff
116	140	25	~	1.7
117	139	23	~	2.2
153	170	18	~	1.7
155	167	13	~	2.2
190	210	21	~	1.7
232	258	27	~	1.7
233	252	20	~	2.2
281	310	30	~	1.7
282	309	28	~	2.2
329	355	27	~	1.7
330	343	14	~	2.2
347	353	7	~	2.2
367	372	6	~	1.7

The DAS curve for your query:

The DAS curve of the query is also available in PostScript format.

You may wish to compare your curve with those obtained for the test set. It gives you an idea about the confidence of the prediction.

"DAS" curves of the test set
These curves are obtained by pairwise comparison of the proteins in the test set in "each against the rest" fashion. There are two cutoffs indicated on the plots: a "strict" one at 2.2 DAS score, and a "loose" one at 1.7. The hit at 2.2 is informative in terms of the number of matching segments, while a hit at 1.7 gives the actual location of the transmembrane segment. The segments reported in the "FT" records of the SwissProt database are marked at 1.0 DAS score ("FT lines").

ALKB_PSEOL, ATPL_ECOLI, COX2_PARDE, COX3_PARDE, CX1B_PARDE, CYDA_ECOLI, CYDB_ECOLI, CYOA_ECOLI, CYOB_ECOLI, CYOC_ECOLI, CYOD_ECOLI, CYOE_ECOLI, DHG_ECOLI, DMSC_ECOLI, DSBB_ECOLI, ENVZ_ECOLI, EXBB_ECOLI, EXBD_ECOLI, FTSH_ECOLI, FTSL_ECOLI, FUCP_ECOLI, GLPT_ECOLI, HISM_SALTY, HISQ_SALTY, HOXN_ALCEU, IMMA_CITFR, KDPD_ECOLI, KGTP_ECOLI, LACY_ECOLI, LSPA_ECOLI, MALG_ECOLI, MELB_ECOLI, MOTA_ECOLI, MOTB_ECOLI, MTR_ECOLI, OPPB_SALTY, OPPC_SALTY, PHOR_ECOLI, RHAT_ECOLI, SECD_ECOLI, SECE_ECOLI, SECY_ECOLI, TOLQ_ECOLI, TOLR_ECOLI