2024+

• *Rattanaprukskul K, Xia-Juan X, Jiang M, Albuquerque-Souza E, Bandyopadhyay D and Sahingur ES (2024+). Molecular signatures of senescence in periodontitis: Clinical insights, (Accepted), Journal of Dental Research


• Datta J and Bandyopadhyay D. (2024+). Bayesian variable shrinkage and selection in compositional data regression: Application to oral microbiome, (Accepted), Journal of the Indian Society for Probability and Statistics [Special Issue: Recent Advances in Statistical Modeling for Complex Endpoints] 


• Zhang C, Al-Mosawi RR, Bandyopadhyay D, Huang H and Lu X. (2024+). Sieve estimation of the additive hazards model with bivariate current status data, (Accepted), Statistics in Biosciences
  


• *Bedia EC, Cancho V, and Bandyopadhyay D. (2024+). A frailty model for multistate semi-competing risk data with applications to colon cancer, (Accepted), Journal of the Indian Society for Probability and Statistics [Special Issue: Recent Advances in Statistical Modeling for Complex Endpoints] 


• Azhar A, *Defor E, Bandyopadhyay D, Kamal L, Tanriover B and Gupta G. (2024+). Long-term effects of center volume on transplant outcomes in adult kidney transplant recipients, (Accepted), Plos One
  


• Poklepovic AS, Gordon S, Kothadia S, McGuire WP, Thacker LR, Deng X, Tombes MB, Shrader E, Hudson D, Bandyopadhyay D, Ryan AA, Kmieciak M, Smith S and  Dent P. (2024). A Phase-I study of regorafenib and sildenafil in adults with advanced solid tumors, Anti-cancer Drugs, 35(5), 450-458


• Sahoo I, Zhao J, Deng X, Gordon M, Cockburn M, Tossas K, Winn R and Bandyopadhyay D. (2024). Lung cancer prevalence in Virginia: A spatial zipcode-level analysis via INLA, Current Oncology, 31, 1129-1144


• Zhao W, Bandyopadhyay D. and Liang H. (2024+). Single-index mixed-effects model for asymmetric bivariate clustered data, (Accepted), Journal of the Indian Society for Probability and Statistics [Special Issue: Recent Advances in Statistical Modeling for Complex Endpoints] 


• #Lee C-Y, Wong KY and Bandyopadhyay D. (2024). Partly linear single-index cure models with a nonparametric incidence link function, Statistical Methods in Medical Research, 33(3), 498-514


• *Acharyya S, Pati D, Sun S and Bandyopadhyay D (2024). A monotone single index model for missing-at-random longitudinal proportion data, Journal of Applied Statistics, 51(6), 1023-1040


• Tong X, #Kim S, Bandyopadhyay D and Sun S. (2024). Association between body fat and body mass index from incomplete longitudinal proportion data: Findings from the Fels study, Journal of Data Science, 22(1), 116-137 [Special Issue: Data Science in Action]


•  Wang W, Yun B, Hoyle RG, Ma Z, Uz Zaman S, Xiong G, Yi C, Xie N, Zhang M, Liu X, Bandyopadhyay D, Li J, Wang C. (2024). CYTOR facilitates formation of FOSL1 phase separation and super enhancers to drive metastasis of tumor budding cells in head and neck squamous cell carcinoma, Advanced Science,  11(4):  2305002


• #Ong C, #Blue CM, Khan J, Deng X, Bandyopadhyay D, Louie RJ, and McGuire KP (2024). Luminal A vs B after choosing Wisely: Does lymph node surgery affect oncologic outcomes?, Annals of Surgical Oncology, 31(1), 335-343


• #Blue CM, #Ong C, Khan J, Deng X, Bandyopadhyay D, Louie RJ, and McGuire KP (2024). Concordant care in sentinel lymph node omission following choosing Wisely® recommendations at a comprehensive cancer center, The American Journal of Surgery, 227, 183-188

2023

• #Bellissimo MP, Carbone S, He J, Jordan JH, Bandyopadhyay D, Hundley WG. (2023). Higher diet quality relates to better cardiac function in cancer survivors: The multi-ethnic study of artherosclerosis, Progress in Cardiovascular Diseases, 81, 10-16


• *Anyaso-Samuel S, Bandyopadhyay D and Datta S. (2023). Pseudo-value regression of clustered current status data with informative cluster size, Statistical Methods in Medical Research, 32(8), 1494-1510


• Riner AN, Herremans KM, Deng X, Bandyopadhyay D, Wexner SD, Trevino JG, Sharp SP. (2023). Racial/Ethnic disparities in the era of minimally invasive surgery for treatment of colorectal cancer, Annals of Surgical Oncology, 31(1), 335-343


•  Lu X, *Wang Y, Bandyopadhyay D and Bakoyannis G. (2023). Sieve estimation of a class of partially linear transformation models with interval-censored competing risks data, Statistica Sinica, 33, 685-704


• *Wang T, He K, Wei M, Bandyopadhyay D and Sinha S. (2023). Minorize-maximize algorithm for the generalized odds rate model for clustered current status data, The Canadian Journal of Statistics, 51(4), 1150-1170


• Kim SJ, Edmonds M, Sutton A, *Retnam R, Bandyopadhyay D and Sheppard V. (2023). Racial disparities in opioid prescription and pain management among breast cancer survivors, Cancer Medicine, 12(9), 10851-10864


• #Lee I, Mai Q, Sinha D, Zhang X and Bandyopadhyay D (2023). Bayesian regression analysis of skewed tensor responses, Biometrics, 79(3), 1814-1825


• Bottinor W, Deng X, Bandyopadhyay D, Coburn G, Havens C, Carr M, Saurers D, Judkins C, Gong W, Yu C, Friedman D, Borinstein SC and Soslow J. (2023). Myocardial strain during surveillance screening is associated with future cardiac dysfunction among survivors of childhood, adolescent and young adult-onset cancer, Cancers, 15(8), 2349


• Quinn BA, Deng X, Sullivan SA, Carter J, Bandyopadhyay D and Fields EC. (2023). Change in vaginal length and sexual function in women who  undergo surgery ± radiation therapy for endometrial cancer, Brachytherapy, 22(3), 334-342


• Shafer D, Kagan AB, Rudek MA, Kmieciak M, Tombes MB, Shrader E, Bandyopadhyay D, Hudson D, Sankala H, Weir C and Grant S. (2023). Phase 1 study of Belinostat and Adavosertib in patients with relapsed or refractory myeloid malignancies, Cancer Chemotherapy and Pharmacology, 91(3), 281-290


• Taylor C, Foreman A, Russell C, Bandyopadhyay D, Deng X, Floyd L, Zelnak A, O'Regan R, Bear H, and Meisel J. (2023). Using oncotype DX breast recurrence score assay to define the role of neoadjuvant endocrine therapy in early-stage hormone receptor-positive breast cancer, Breast Cancer Research and Treatment, 199(1), 91-98


• #Lee CY, Wong KY, Lam KF and Bandyopadhyay D. (2023). A semiparametric joint model for cluster size and subunit-specific interval-censored outcomes, Biometrics, 79(3), 2010-2022


• *Azevedo DRM, Prates MO and Bandyopadhyay D. (2023). Alleviating spatial confounding in frailty models, Biostatistics, 24(4), 945-961


• #Willard P, Olasehinde T, Zeid NB, Hang Y, *Defor E, Bandyopadhyay D and Yazbeck V. (2023). Outcomes of cancer patients with COVID-19: The Virginia Commonwealth University experience, Cancer Investigation, 41(5), 456-466


• Ke C, Bandyopadhyay D and Sarkar D (2023). Gene screening for prognosis of non-muscle-invasive bladder carcinoma under competing risks endpoints, Cancers, 15(2), 379


• *Um S, Linero A, Sinha D and Bandyopadhyay D (2023). Bayesian additive regression trees for multivariate skewed responses, Statistics in Medicine, 42(3), 246-263

2022

• Ke C, Bandyopadhyay D, Acunzo M and Winn R. (2022). Gene-screening in high-throughput right-censored lung cancer data, Onco, 2(4), 305-318


• *Wang T, Bandyopadhyay D and Sinha S. (2022). Efficient estimation of the additive risks model for interval-censored data, In: Sun, J., Chen, DG. (eds) Emerging Topics in Modeling Interval-Censored Survival Data, ICSA Book Series in Statistics. Springer, Cham, Switzerland., 167-192


• Gharai LR, Ovanez C, Goodman WC, Deng X, Bandyopadhyay D, Aboutanos MB and Parker MS. (2022). Minimal aortic injury detected on computed tomography angiography during initial trauma imaging: Single academic level I trauma center experience, AORTA - Official Journal of the Aortic Institute at Yale-New Heaven Hospital, 10(6), 265-273


• #Montefusco D, Jamil M, Maczis MA, Schroeder W, Harland M, Levi M, Ranjit S, Allegood J, Retnam R, Bandyopadhyay D, Spiegel S and Cowart A. (2022). Sphingosine Kinase 1 mediates sexual dimorphism in fibrosis in a mouse model of NASH, Molecular Metabolism, 62, 101523


• #Al-Juhaishi T, Deng X, Bandyopadhyay D and Paul AK. (2022). Role of cytoreductive nephrectomy and targeted therapy in patients with sarcomatoid renal cell carcinoma: A population-based analysis using SEER database, The Cureus Journal of Medical Science, 14(5), e25395


• #Freudenberger DC, Deng X, Vudatha V, Riner AN, Herremans KM, Bandyopadhyay D, Fernandez LJ, Trevino JG. (2022). Racial disparities in cytoreductive surgery and hyperthermic intraperitoneal chemotherapy: Does aggressive surgical treatment overcome cancer health inequities? Frontiers in Oncology, 12, 899488


• Choi S, *Choi T, Lee H-Y, Han SW and Bandyopadhyay D. (2022). Doubly-robust methods for differences in restricted mean lifetimes using pseudo-observations, Pharmaceutical Statistics, 21(6), 1185-1198


• Naavaal S, Garcia DT, Deng X and Bandyopadhyay D. (2022). Association between periodontal disease and oral cancer screening among US adults: NHANES 2011-2014, Community Dentistry and Oral Epidemiology, 50(3), 216-224

• Akinkugbe AA, Brickhouse TH, Bandyopadhyay D, Nascimento MM and Slade GD. (2022). Prepregnancy BMI, gestational weight gain and offspring caries experience: Avon longitudinal study of parents and children, Plos One, 17(3): e0266247


• *Lan Z, Reich BJ, Guinness J, Bandyopadhyay D, Ma L and Moeller G. (2022). Geostatistical modeling of positive-definite matrices: An application to diffusion tensor imaging, Biometrics, 78(2), 548-559


• Bakoyannis G and Bandyopadhyay D. (2022). Nonparametric tests for multistate processes with clustered data, Annals of the Institute of Statistical Mathematics, 74, 837-867


• *Yu JW, Bandyopadhyay D, Yang S, Kang L and Gupta G. (2022). Propensity score modeling in electronic health records with time-to-event endpoints: Application to kidney transplantation, Journal of Data Science, 20(2), 188-208


• Choi S, *Choi T, Cho H and Bandyopadhyay D. (2022). Weighted least-squares regression with competing risks data, Statistics in Medicine, 41(2), 227-241


• Zhou L, Pei X, Zhang Y, Ning Y, Li L, Hu, X, Chalasani SL, Sharma K, Nkwocha J, Yu J, Bandyopadhyay D, Sebti SM, Grant S. (2022). Chk1 inhibition potently blocks STAT3 tyrosine705 phosphorylation, DNA binding/transcriptional activity, and activation of downstream targets in human myeloma cells, Molecular Cancer Research, 20(3), 456-467


• Sevdalis AE, Alex A, Simpson MH, Bandyopadhyay D, Deng X and McGuire KP. (2022). The value of Tyrer-Cuzick vs. Gail risk modeling in predicting benefit from screening MRI in breast cancer, European Journal of Breast Health, 18(1), 79-84


• Aqbi HF, Mirshahi F, Manjili SH, Saneshaw M, Bandyopadhyay D, Dozmorov M, Benson Z, Khosla A, Pokkalla H, Mountain V, Wack K, Resnick M, Beck AB, Carrasco-Zevallos OM, Wapinski I, Idowu MO, Sanyal AJ, Manjili MH. (2022). Distinct hepatic immunological patterns are associated with the progression or inhibition of hepatocellular carcinoma, Cell Reports, 38(9), 110454


• Bhoopati P, Pradhan AK, Kumar A, Maji S, Mannagati P, Deng X, Bandyopadhyay D, Sarkar D, Wang X-Y, Landry JW, Das SK, Emdad L and Fisher P. (2022). Conversion of a non-cancer selective promoter into a cancer-selective promoter, Cancers, 14, 1497

 2021

• Abdel-Salam A-SG, Mollazehi M, Bandyopadhyay D, Malki A, Shi Z, Zayed H. (2021). Assessment of lung cancer risk factors and mortality in Qatar: A case series study, Cancer Reports, 4(1), e1302


• Jercois AM, Dcona M, Deng X, Bandyopadhyay D, Grossman SR, Schiffer CA and Royer WE. (2021). CryoEM structure of CtBP2 confirms tetrameric architecture, Structure, 29(4), 310-319    


• Holkova B, Shafer D, Yazbeck V, Dave S, Bose P, Tombes MB, Shrader E, Wan W, Bandyopadhyay D, Weir C, Collins E, Garnett A, Kmieciak M, Roberts JD, Garcia-Manero G, Grant S. (2021). Phase-I study of Belinostat (PXD-101) and Bortezomib (Velcade, Ps-351) in patients with relapsed or refractory acute leukemia and myelodysplastic syndrome, Leukemia and Lymphoma, 62(5), 1187-1194


• Sullivan SA, Hawkins G, Zhao X, Jo H, Hayes N, Deng X, Bandyopadhyay D, Bae-Jump VL, Rossi EC. (2021). Genomic profiling of endometrial cancer and relationship with volume of endometrial cancer disease spread, Gynecologic Oncology Reports, 36, 100720


• Prates MO, *Azevedo DRM, Godoy LC and Bandyopadhyay D. (2021). Can transformed Gaussian random fields handle spatial confounding?, Journal of the Indian Statistical Association, 59(2), 1-23


• Sutton SA, Felix AS, Bandyopadhyay D, Retnam R, Hundley WG and Sheppard VB. (2021). Cardioprotective medication use in black and white breast cancer survivors, Breast Cancer Research and Treatment, 188(3), 769-778


• Tyutyunyk-Massey L, Sun Y, Dao N, Ngo H, Dammalapati M, Vaidyanathan A, Singh M, Haqqani S, Haueis J, Finnegan R, Deng X, Kirberger S, Bos P, Bandyopadhyay D, Pomerantz W, Pommier Y, Gewirtz D and Landry JW. (2021). Autophagy dependent sensitization of triple negative breast cancer models to topoisomerase II poisons by inhibition of the nucleosome remodeling factor, Molecular Cancer Research, 19(8), 1338-1349


• Bonikowske AR, Carpenter KC, Stovitz S, Bandyopadhyay D, Pereira MA and Lewis BA. (2021). Acute effect of height-adjustable workstations on blood glucose levels in women with impaired fasting glucose levels while working: A pilot study, Translational Journal of the American College of Sports Medicine, 6(4), e000171


• Bandyopadhyay D, Hilden P, Pati D, Fernandes J, Russell SL, Fellows JL and Nagarajan R. (2021). Correlated tooth-level caries status in a Type-2 diabetic Gullah population, Modern Approaches in Dentistry and Oral Health Care, 5(1), 441-447


• Xie J, Cho H, Lin BM, Pillai M, Heimisdottir LH, Bandyopadhyay D, Zou F, Roach J, Divaris K and Wu D. (2021). Improved metabolite prediction using microbiome data-based elastic net models, Frontiers in Cellular and Infection Microbiology, section Microbiome in Health and Disease, 11, 734416    doi: 10.3389/fcimb.2021.734416


• *Lan Z., Reich BJ and Bandyopadhyay D. (2021). A spatial Bayesian semiparametric mixture model for positive definite matrices with applications in diffusion tensor imaging, The Canadian Journal of Statistics, 49(1), 129-149    [Won the 2019 Best Student paper award competition of the ASA's Section on Mental Health & Section on Imaging]


• Zhang F, Li R, Lian H and Bandyopadhyay D. (2021). Sparse reduced-rank regression for multivariate varying-coefficient models, Journal of Statistical Computation and Simulation, 91(4), 752-767


• Bandyopadhyay D, Prates M, *Zhao X and Lachos VH. (2021). Spatial skew-normal/independent models for non-randomly missing clustered data, Statistics in Medicine, 40(13), 3085-3105


• Lock E and Bandyopadhyay D. (2021). Bayesian nonparametric multiway regression for clustered binomial data, Stat, 10(1), e378


• Lam KF, *Lee CY, Wong KY and Bandyopadhyay D.(2021). Marginal analysis of current status data with informative cluster size using a class of semiparametric transformation cure models, Statistics in Medicine, 40(10), 2400-2412


• *Azevedo DRM, Prates MO and Bandyopadhyay D. (2021). MSPOCK: Alleviating spatial confounding in multivariate disease mapping models, Journal of Agricultural, Biological and Environmental Statistics, 26, 464-491


• Swihart BJ and  Bandyopadhyay D. (2021). Bridged parametric survival models: General paradigm and speed improvements, Computer Methods and Programs in Biomedicine, 206, 106115


• *Lan Z, Reich BJ and Bandyopadhyay D. (2021). Probabilistic diffusion MRI fiber-tracking using a directed acyclic graph auto-regressive model of positive definite matrices, Journal of Statistical Research, 55(1), 147-158


• *Wang P, Ma TF, Bandyopadhyay D, Tang Y and Zhu J. (2021). Composite likelihood inference for ordinal periodontal data with replicated spatial patterns, Statistics in Medicine, 40(26), 5871-5893


• *Zhao X, Zhang L and Bandyopadhyay D. (2021). A shared spatial model for multivariate extreme-valued binary data with non-random missingness, Sankhya – Series B, 83, 374-396

 2020

• Akinkugbe AA, Brickhouse TH, Bandyopadhyay D, Nascimento MM. (2020). Accuracy of maternal reports of young children's dental disease status: Avon longitudinal study of parents and children, Dentistry Journal, 8(1), 8


• Kamal L, Yu JW, Reichman T, Kang L, Bandyopadhyay D, Kumar D, King A, Gautam U, Bhatti C, Yakuba I, Lacy K, Levy M and Gupta G. (2020). Impact of induction immunosupression strategies in simultaneous liver and kidney transplantation, Transplantation, 104(2), 395-403


• Shafer D, Harris T., Tombes MB., Shrader E., Ryan A., Dent P., Bandyopadhyay D., Malkin M. (2020). Phase-I trial of dimethyl fumarate, temozolomide, and radiation therapy in gliboblsatoma multiforme, Neuro-Oncology Advances, 2(1), vdz052


• *Wang Y, Bandyopadhyay D, Shaffer JR, Wu X. (2020). Gene-based association mapping for dental caries in the GENEVA program, Journal of Dentistry and Dental Medicine, 3(4), 156


• # Xu J, Bandyopadhyay D, Chakraborty B, Mirzaei S and Michalowicz B. (2020). SMARTp: A SMART design for non-surgical treatment of chronic periodontitis with spatially-referenced and non-randomly missing skewed outcomes, Biometrical Journal, 62(2), 282-310


• Zhang L and Bandyopadhyay D. (2020). A graphical model for skewed matrix-variate non-randomly missing data, Biostatistics, 21(2), e80-e97 [Online only article]


• Shin Y, Sun S and Bandyopadhyay D. (2020). Impact of adoloscent obesity on middle-age health of women given data MAR, Biometrical Journal, 62(7), 1702-1716


• Gayawan E., *Fasusi OD, Bandyopadhyay D. (2020). Structured additive distributional zero augmented beta regression modeling of mortality in Nigeria, Spatial Statistics, 35, 100415


• *Jhuang A-T, Feuntes M, Bandyopadhyay D and Reich BJ. (2020). Spatiotemporal signal detection using continuous shrinkage priors, Statistics in Medicine, 39(13), 1817-1832


• *Li Y, Bandyopadhyay D, Xie F and Xu Y (2020). BAREB: A Bayesian repulsive biclustering model for periodontal data, Statistics in Medicine, 39(16), 2139-2151


• *Guan Q, Reich BJ, Laber E and Bandyopadhyay D. (2020). Bayesian nonparametric policy search with applications to periodontal recall intervals, Journal of the American Statistical Association - Applications & Case Studies, 105(531), 1066-1078 [Won 2017 ENAR Distinguished Student Paper Award, 2017 ASA Health Policy Statistics Section Student Travel Award & 2021 ASA's Outstanding Statistical Applications Award]


• *Azevedo DRM, Bandyopadhyay D, Prates MO, Abdel-Salam A-SG and Garcia D. (2020). Assessing spatial confounding in cancer disease mapping using R, Cancer Reports, 3(4), e1263

 2019

• *Yu JW, Gupta G, Kang L, Bandyopadhyay D, Siddiqui MS, Bhati C, Stravitz TR, Levy M, Reichman TW. (2019). Obesity does not significantly impact outcomes following simultaneous liver kidney transplantation: Review of the UNOS database - a retrospective study, Transplant International, 32(2), 206-217


• Quinn BA, Deng X., Colton A, Bandyopadhyay D, Carter J, Fields EC. (2019). Increasing age predicts poor cervical cancer prognosis with subsequent effect on treatment and overall survival, Bracytherapy, 18, 29-37


• McLaughlin C, Kim N-K, Bandyopadhyay D, Deng X, Kaplan B, Martin K, Fields E. (2019). Adjuvant radiation therapy for T4 non-rectal colon adenocarcinoma provides a cause-specific survival advantage: A SEER database analysis, Radiotherapy and Oncology aka The Green Journal , 133, 50-53


• Claiborne J, Bandyopadhyay D, Roberts C, Hawks K, Aziz M, Simmons G, Weidl C, Chung H, Clark W, McCarty J, Toor A. (2019). Managing post allograft relapse of myeloid neoplasms: azacitidine and donor lymphocyte infusions as salvage therapy, Leukemia and Lymphoma, 60(11), 2733-2743


• Dcona MM, Damle PK, Zarate-Perez F, Morris BL, Nawaz Z, Dennis MJ, Deng X, Korwar S, Singh SJ, Ellis KC, Royer WE, Bandyopadhyay D, Escalante C and Grossman SR. (2019). Active-site tryptophan, the target of antineoplastic CtBP inhibitors, mediates inhibitor disruption of CtBP oligomerization and transcription coregulatory activities, Molecular Pharmacology, 96(1), 99-108


• Gordon SW, McGuire III WP, Shafer DA, Sterling RK, Lee HM, Matherly SC, Roberts JD, Bose P, Tombes MB, Shrader E, Ryan A, Kmieciak M, Nguyen T, Deng X, Bandyopadhyay D, Dent P, Poklepovic A. (2019). Phase-I Study of Sorafenib and Vorinostat in Advanced Hepatocellular Carcinoma, American Journal of Clinical Oncology, 42(8), 649-654


• Zhang Y, Zhou L, Bandyopadhyay D, Sharma K, Allen A, Kmieciak M, Grant S (2019). The covalent CDK7 inhibitor THZ1 potently induces apoptosis in multiple myeloma cells in vitro and in vivo, Clinical Cancer Research, 25(20), 6195-6205


• *Bhingare A, Sinha D, Pati D, Bandyopadhyay D and Lipsitz SR. (2019). Semiparametric Bayesian latent variable regression for skewed multivariate data, Biometrics, 75(2), 528-538 [Won 2017 ASA-SBSS student travel award; 2018 ENAR Distinguished Student Paper award]

 2018

• Aqbi HF, Tyutyunyk-Massey L, Keim RC, Joshi S, Butler SE, Smith TM, Bandyopadhyay D, Idowu MO, Bear HD, Payne K, Gewirtz DA, Manjili MA. (2018). Autophagy-deficient breast cancer show early recurrence following chemotherapy, Oncotarget, 9(31), 22113-22122


• Poklepovic A, Qu Y, Dickinson M, Kontos MC, Kmieciak M, Shultz E, Bandyopadhyay D, Deng X, Kukreja R. (2018). Randomized study of doxorubicin-based chemotherapy regimes, with and without sildenafil, with analysis of intermediate cardiac markers, Cardio-Oncology, 4(7), 1-12


• *Chernokhouva A, Hussein A, Nkurunziza S and Bandyopadhyay D (2018). Bayesian inference in time-varying additive hazards model with applications to disease mapping, Environmetrics, 29(5-6), e2478 [Special Issue celebrating TIES 25th Anniversary]


• Zhao W, Lian H and Bandyopadhyay D. (2018). A partially linear additive model for clustered proportion data, Statistics in Medicine, 37(6), 1009-1030


• *Ordonez JA, Bandyopadhyay D, Lachos VH and Cabral CR. (2018). Geostatistical estimation and prediction for censored responses, Spatial Statistics, 23, 109-123


• Wu X, Guan T, Liu DJ, Leon-Novelo LG and Bandyopadhyay D. (2018). Adaptive-weight burden test for associations between quantitative traits and genotype data with complex correlations, The Annals of Applied Statistics, 12(3), 1558-1582

 2017

• Meier J, Hyun M, Cantwell M, Raza A, Mertens C, Raje V, Sisler J, Tracy E, Torres-Odio S, Gispert S, Shaw P, Baumann H, Bandyopadhyay D, Takabe K, Larner AC. (2017). A stress-induced dynamic regulation of mitochondrial STAT3 and its association with Cyclophilin D, Science Signalling, 10(472), eaag2588


• Gupta G, *Garcia V, Kang L, *Yu JW, Limkemann AJ, Bandyopadhyay D, Kumar D, Fattah H, Levy M, Cotterell AH, Sharma A, Bhati CS, Reichman T, King AL, Sterling RK. (2017). Long-term outcomes and transmission rates in Hepatitis-C virus positive donors to Hepatitis C negative kidney transplant recipients: Analysis of national data, Clinical Transplantation, 31:e13055


• Lan L, Bandyopadhyay D and Datta S. (2017). Nonparametric regression in clustered multistate current status data with informative cluster size, Statistica Neerlandica, 71(1), 31-57


• *Galarza CE, Lachos VH and Bandyopadhyay D. (2017). Quantile regression for linear mixed models: A stochastic approximation EM approach, Statistics and Its Interface, 10(3), 471-482


• Bandyopadhyay D, *Galvis DM and Lachos VH (2017). Augmented mixed models for clustered proportion data, Statistical Methods in Medical Research, 26(2), 880-897


• *Lewis B, Bandyopadhyay D, DeSantis SM and John MT. (2017). Augmented beta regression for periodontal proportion data via the SAS NLMIXED procedure, Journal of Applied Probability and Statistics, 12(1), 49-66


• Cai B, Bandyopadhyay D. (2017). Bayesian semiparametric variable selection with applications to periodontal data, Statistics in Medicine, 36(14), 2251-2264

 2016

• Khammanivong A, Anandharaj A, Qian X, Song JM, Upadhyay P, Balbo S, Bandyopadhyay D, Dickerson E, Hecht SS and Kassie F. (2016). Transciptome profiling in oral cavity and esophagus tissues from (S)-N'-nitrosonornicotine-treated rats reveals candidate genes involved in human oral cavity and esophageal carcinogenesis, Molecular Carcinogenesis, 55(12), 2168-2182


• Rener-Sitar K, John MT, Pusalavidyasagar SS, Bandyopadhyay D and Schiffman E. (2016). Sleep quality in temporomandibular disorder cases, Sleep Medicine, 25, 105-112


• Bandyopadhyay D, Jacome-Pumar A. (2016). Comparing conditional survival functions with missing population marks in a competing risk model, Computational Statistics and Data Analysis, 95, 150-160


• Bandyopadhyay D, Canale A. (2016). Nonparametric spatial models for clustered ordered periodontal data, Journal of the Royal Statistical Society - Series C, 65(4), 619-640


• Jin I-H, Yuan Y and Bandyopadhyay D. (2016). A Bayesian hierarchical spatial model for dental caries assessment using non-Gaussian Markov random fields, The Annals of Applied Statistics, 10(2), 884-905

 2015

• Khariwala SS, Carmella SG, Stepanov I, Bandyopadhyay D, Nelson HH, Yueh B, Hatsukami DK and Hecht SS. (2015). Self-reported tobacco use does not correlate with carcinogen exposure in smokers with head and neck cancer, The Laryngoscope, 125(8), 1844-1848


• Grill AE, Schmitt T, Gates LA, Lu D, Bandyopadhyay D, Yuan J-M, Murphy SE and Peterson LA. (2015). Abundant rodent furna-derived urinary metabolites are associated with tobacco smoke exposure in humans, Chemical Research in Toxicology, 28(7), 1508-1516


• Alvarez J, Sarradell J, Kerkaert B, Bandyopadhyay D, Torremorell M, Morrison R and Perez A. (2015). Effect of influenza A virus and porcine reproductive and respiratory syndrome virus in sow farms on post-weaving mortality, Preventive Veterinary Medicine, 121(3-4), 240-245


• Bandyopadhyay D, Castro LM, Lachos VH and Pinheiro H (2015). Robust joint monlinear mixed-effects models for censored HIV viral loads with covariate measurement error, Journal of Agricultural, Biological and Environmental Statistics, 20(1), 121-139


• *Schnell P, Bandyopadhyay D, Reich BJ and Nunn M. (2015). A marginal cure-rate proportional hazards model for spatial survival data, Journal of the Royal Statistical Society - Series C, 64(4), 673-691


• *Matos LM, Bandyopadhyay D, Castro LM and Lachos VH. (2015). Influence assessment in censored mixed-effects models using the multivariate Student's-t distribution, Journal of Multivariate Analysis, 141, 104-117

 2014

• Rener-Sitar K, John MT, Bandyopadhyay D, Howell MJ and Schiffman E. (2014). Exploration of dimensionality and psychometric properties of the Pittsburgh sleep quality index in patients with temporomandibular disorders, BMC Health and Quality of Life Outcomes, 12(10), 1-9


• Misono S, Peterson C, Meredith L, Banks K, Bandyopadhyay D, Yueh B and Frazier P. (2014). Psychosocial distress in patients presenting with voice concerns, Journal of Voice, 28(6), 753-761


• Parker NP, Misono S, Goding GS and Bandyopadhyay D, (2014). In Response to Endoscopic cold incision, baloon dilation, mitomycin-c application and steroid injection for adult laryngotracheal stenosis, Laryngoscope, 124(3), E105


• Romero GE, Lockridge AD, Morgans CW, Bandyopadhyay D and Miller RF. (2014). The postnatal development of D-serine in the retinas of two mouse strains, including a mutant mouse with deficiency in D-amino acid oxidase and serine racemase knockout mouse, ACS Chemical Neuroscience, 5(9), 848-854


• *Galvis DM, Bandyopadhyay D and Lachos VH. (2014). Augmented mixed beta regression models for periodontal proportion data, Statistics in Medicine, 33(21), 3759-3771 [Related thesis selected for honorable mention in the 2015 CAPES Best Thesis award among all areas of Mathematical Sciences from the Brazilian Ministry of Education.]


• Park J-H, Bandyopadhyay D and Letourneau E. (2014). Examining deterrence of adult sex crimes: A semiparametric intervention time-series approach, Computational Statistics and Data Analysis, 69, 198-207


• *Parker AJ, Bandyopadhyay D and Slate E. (2014). An augmented spatial beta regression model for periodontal proportion data, Statistical Modeling: An International Journal, 14(6), 503-521


• Castro LM, Lachos VH, *Galvis DM and Bandyopadhyay D (2014). Bayesian semiparametric longitudinal data modeling using normal/independent densities, Book Chapter, CRC Special Issue on Current Trends in Bayesian Methodology with Applications, Edited by S.K.Upadhyay, Umesh Singh, Dipak K. Dey and Appaia Loganathan, 157-180

 2013

• Letourneau EJ, Armstrong KS, Bandyopadhyay D and Sinha D. (2013). Sex offender registration and notification policy increases juvenile plea bargains, Sexual Abuse - A Journal of Research and Treatment, 25(2), 189-207


• Parker NP, Bandyopadhyay D, Misono S and Goding GS. (2013). Endoscopic cold incision, baloon dilation, mitomycin-c application and steroid injection for adult laryngotracheal stenosis, Laryngoscope, 123(1), 220-225


• DeSantis SM, Bandyopadhyay D, Prisciandaro JJ, Baker NL, Randall PK, Anton R. (2013). Modeling longitudinal data in substance use clinical trials: an application to the COMBINE study, Drug and Alcohol Dependence, 142(1-2), 244-250


• Sora ND, Marlow NM, Bandyopadhyay D, Leite RS, Slate EH and Fernandes JK. (2013). Association between metabolic syndrome and the extent of severe periodontitis in Gullah African Americans, Journal of Clinical Periodontology, 40(6), 591-606


• Bandyopadhyay D (2013). From mouth-level to tooth-level DMFS: Conceptualizing the theoretical framework, Journal of Dental, Oral and Craniofacial Epidemiology, 1(1), 3-8


• Balbo S, James-Yi S, Johnson C, O'Sullivan MG, Stepanov I, Wang M, Bandyopadhyay D, Kassie F, Carmella S, Upadhyaya P and Hecht SS. (2013). (S)-N'-Nitrosonornicotine, a constituent of smokeless tobacco, is a powerful oral cavity carcinogen in rats, Carcinogenesis, 34(9), 2178-2183


• Wang M, Cheng G, Khariwala SS, Bandyopadhyay D, Villalta PW, Balbo S and Hecht SS. (2013). Evidence for Endogenous Formation of the Hepatocarcinogen N-Nitrosodihydrouracil in Rats Treated with Dihydrouracil and Sodium Nitrite: a Potential Source of Human Hepatic DNA Carboxyethylation, Chemico-Biological Interactions, 206(1), 83-90


• Nieto-Barajas LE and Bandyopadhyay D. (2013). A zero-inflated spatial gamma process model with applications to disease mapping, Journal of Agricultural, Biological and Environmental Statistics, 18(2), 137-158


• Cancho VG, Bandyopadhyay D, Louzada-Neto F and Yiqi. B. (2013). The destructive negative binomial cure rate model with latent activation, Statistical Methodology, 13, 48-68


• *Boehm L, Reich BJ and Bandyopadhyay D. (2013). Bridging conditional and marginal shapes for spatially-referenced binary data, Biometrics,69(2), 545-554[Won 2013 ENAR John Van Ryzin award as the best paper submitted to the ENAR Distinguished Student Paper award competition]


• Reich BJ, $Bandyopadhyay D and Bondell H. (2013). A nonparametric spatial model for periodontal data with non-random missingness, Journal of the American Statistical Association - Applications & Case Studies, 108(503), 820-831 [$ = joint 1st author]


• *Mustvari T, Bandyopadhyay D, Lesaffre E and Declerck D. (2013). A multilevel model for spatially correlated binary data in the presence of misclassification: An application in oral health research, Statistics in Medicine, 32(30), 5241-5259

 2012

• John MT, Larsson P, Nilner K, Bandyopadhyay D and List T. (2012). Validation of the orofacial esthetic scale in the general population, Health and Quality of Life Outcomes, 10(1), 135-141


• Trivedi R, Wilson ME and Bandyopadhyay D. (2012). Refractive shift in pseudophakic eyes during second decade of life, Journal of Cataract and Refractive Surgery, 38(1), 102-107


• Egan BM, Shaftman SR, Wagner CS, Bandyopadhyay D and Szymanski KA (2012). Demographic differences in the treatment and control of glucose in Type-2 diabetic patients: implications for healthcare practice, Ethnicity and Disease, 22(1), 29-37


• Yuen HK, Westwater C, DeGarmo J and Bandyopadhyay D. (2012). Immediate effect of Xylitol chewing gum and mouth rinse on salivary levels of mutans streptococci in adults with systemic sclerosis - a pilot study, Journal of Experimental and Integrative Medicine, 2(1), 89-92


• Prisciandaro JJ, DeSantis SM and Bandyopadhyay D. (2012). Simultaneous modeling of the impacts of treatment on alcohol consumption and quality of life in the COMBINE study: a coupled hidden Markov analysis, Alcoholism: Clinical and Experimental Research, 36(12), 2141-2149


• Voss TS, Elm JE, Wielinski C, Aminoff MJ, Bandyopadhyay D, Chou KL, Sudarsky L and Tilley BC. (2012). Fall frequency and risk assessment in early Parkinson's disease, Parkinsonism and Related Disorders, 18(7), 837-841


• Egan BM, Bandyopadhyay D, Shaftman SR, Wagner CS, Zhao Y and Yu-Isenberg K. (2012). Initial mono- and combination therapy and hypertension control the first year, Hypertension, 59(6), 1124-1131


• Bandyopadhyay D, Lachos VH, Castro LM and Dey DK. (2012). Skew-normal/independent linear mixed models for censored responses with applications to HIV viral loads, Biometrical Journal, 54(3), 405-425


• *VanMeter EM, Garett-Mayer E and Bandyopadhyay D. (2012). Dose finding clinical trial design for ordinal toxicity grades using the continuation ratio model: an extension of the continual reassessment method, Clinical Trials, 9(3), 303-313

 2011

• Marlow N, Slate E, Bandyopadhyay D, Salinas C and Fernandes J. (2011). An evaluation of serum albumin, root caries and other covariates in Gullah African-Americans with Type-II diabetes, Community Dentistry and Oral Epidemiology, 39(2), 186-192.


• DeSantis SM, Baker NL, Back SE, Spratt E, *Ciolino JD, Moran-Santa MM, Bandyopadhyay D and Brady KT (2011). Gender differences in the effect of early life trauma on HPA axis functioning, Depression and Anxiety, 28(5), 383-392.


• Marlow N, Slate E, Bandyopadhyay D, Fernandes J and Leite R. (2011). Health insurance status is associated with periodontal disease progression among Gullah African-Americans with Type-II diabetes mellitus, Journal of Public Health Dentistry, 71(2), 143-151


• Gray KM, Riggs PD, Min S-J, Mikulich-Gilbertson SK, Bandyopadhyay D and Winhusen T. (2011). Cigarette and cannabis use trajectories among adoloscents in treatment for attention-deficit/hyperactivity disorder and substance use disorders, Drug and Alcohol Dependence , 117(2-3), 243-247


• DeSantis S and Bandyopadhyay D. (2011). Hidden Markov models for zero-inflated Poisson counts with an application to substance use, Statistics in Medicine, 30(14), 1678-1694


• #Lachos VH, Bandyopadhyay D and Dey DK. (2011). Linear and non-linear mixed-effect models for censored HIV viral loads using normal/independent distributions, Biometrics, 67(4), 1594-1604 Supplementary Material


• Bandyopadhyay D, DeSantis SM, Korte JE and Brady KT. (2011). Some considerations for excess zeroes in substance abuse research, American Journal of Drug and Alcohol Abuse, 37(5), 376-382


• Yuen HK, *Weng Y, Bandyopadhyay D, Mahoney S, Reed SG, Silver RM and Leite RL. (2011). Effect of multi-faceted intervention on gingival health among adults with systemic sclerosis, Clinical and Experimental Rheumatology, 29(Suppl. 65), S26-S32


• Abdel-Hafez G, Trivedi RH, Wilson ME and Bandyopadhyay D. (2011). Use of aphakic refraction for secondary in-the-bag introcular lens power estimation in the pediatric population: a comparison of two formulas, Journal of the American Association for Pediatric Opthalmology and Strabismus, 15(5), 432-434.


• Swearingen CJ, Tilley BC, Adams RJ, Rumboldt Z, Nicholas JS, Bandyopadhyay D and Woolson RF. (2011). Application of Beta regression to analyze ischemic stroke volume in NINDS rt-PA clinical trials, Neuroepidemiology, 37(2), 73-82


• Korte JE, Magruder KM, Chiuzan C, Logan S, Killeen T, Bandyopadhyay D, Brady KT. (2011). Assessing drug use during follow-up: direct comparison of candidate outcome definitions in pooled analyses of addiction treatment studies, The American Journal of Drug and Alcohol Abuse, 37(5), 358-366


• Bandyopadhyay D, Reich BJ and Slate E. (2011). A spatial Beta-Binomial model for clustered count data on dental caries, Statistical Methods in Medical Research, 20(2), 85-102


• Lachos VH, Bandyopadhyay D and Garay AM. (2011). Heteroscedastic non-linear regression models based on scale mixtures of skew-normal distributions, Statistics and Probability Letters, 81(8), 1208-1217 Supplementary Material


• *VanMeter EM, Garett-Mayer E and Bandyopadhyay D. (2011). Proportional odds model for dose finding clinical trial designs with ordinal toxicity grading, Statistics in Medicine, 30(17), 2070-2080 [Won 2010 Society for Clinical Trials Student Presentation Award]


• *Li X, Bandyopadhyay D, Lipsitz S and Sinha D. (2011). Likelihood methods for binary responses of present components in a cluster, Biometrics, 67(2), 629-635 [Won 2010 ENAR Distinguished Student Paper Award]

 2010

• Letourneau E, Levenson J, Bandyopadhyay D, Sinha D and Armstrong K. (2010) Effects of South Carolina's sex offender registration and notification policy on adult recidivism, Criminal Justice Policy Review, 21(4), 435-458.


• Yuen HK, *Wolf BJ, Magruder KM, Bandyopadhyay D, Selassie AW, Salinas CF. (2010). Factors that limit access to dental care for people with spinal cord injury, Special Care in Dentistry, 30(4), 151-156.


• Letourneau E, Levenson J, Bandyopadhyay D, Armstrong K and Sinha D. (2010).The effects of sex offender registration and notification on judicial decisions, Criminal Justice Review, 35(3), 295-317.


• Letourneau E, Bandyopadhyay D, Armstrong K, Sinha D. (2010). Do sex-offender registration and notification requirements deter juvenile sex crimes?, Criminal Justice and Behavior, 37(5), 553-569.


• Letourneau E, Levenson JS, Bandyopadhyay D, Armstrong K, Sinha D. (2010). Effects of South Carolina's sex offender registration and notification policy on deterrence of sex crimes, Criminal Justice and Behavior, 37(5), 537-552.


• Bandyopadhyay D, Marlow N, Fernandes JK, Leite R. (2010). Periodontal disease progression and glycemic control among Gullah African-Americans with type-2 diabetes, Journal of Clinical Periodontology, 37(6), 501-509.


• Bandyopadhyay D, Jacome-Pumar A. (2010). Nonparametric estimation of conditional cumulative hazards for missing population marks, Australian and New Zealand Journal of Statistics, 52(1), 75-91


• *Lin L, Bandyopadhyay D, Lipsitz S and Sinha D (2010). Association models for clustered data with binary and continuous responses, Biometrics, 66(1), 287-293


• Subramanian S and Bandyopadhyay D. (2010). Doubly robust semiparametric estimation for the missing censoring indicator model, Statistics and Probability Letters, 80(7-8), 621-630


• Reich BJ, Bandyopadhyay D. (2010). A latent factor model for spatial data with informative missingness, The Annals of Applied Statistics, 4(1), 439-459


• Abanto-Valle CA, Bandyopadhyay D, Lachos VH and Enriquez I. (2010). Robust Bayesian analysis of heavy-tailed stochastic volatility models using scale mixtures of normal distribution, Computational Statistics & Data Analysis, 54(12), 2883-2898


• Bandyopadhyay D, Sinha D, Lipsitz S, Letourneau E. (2010). Changing approaches of prosecutors towards juvenile repeated sex-offenders: a Bayesian evaluation, The Annals of Applied Statistics, 4(2), 805-829


• Datta S, Bandyopadhyay D, and Satten G. (2010). Inverse probability of censoring weighted U-statistics for right censored data with applications to testing of hypothesis, Scandinavian Journal of Statistics, 37(4), 680-700 [Won 2011 CDC/ATSDR Statistical Science Award for best theoretical paper]


• Bandyopadhyay D, Lachos VH, Abanto-Valle C and Ghosh P. (2010). Linear mixed models for skew-normal/independent bivariate responses with an application to periodontal disease, Statistics in Medicine, 29(25), 2643-2655 Supplementary Material

 2009

• Yuen HK, *Mountford WK, Magruder KM, Bandyopadhyay D, Hudson PL, Summerlin LM, Salinas CF (2009). Adequacy of oral health information for patients with diabetes, Journal of Public Health Dentistry, 69(2), 135-141.


• Letourneau E, Bandyopadhyay D, Sinha D, Armstrong K (2009). The influence of sex offender registration on juvenile sexual recidivism, Criminal Justice Policy Review, 20(2), 136-153.


• Letourneau E, Bandyopadhyay D, Sinha D, Armstrong K (2009). Effects of sex offender registration policies on juvenile justice decision making, Sexual Abuse: A Journal of Research and Treatment, 21(2), 149-165.


• Welton JM, Zone-Smith L and Bandyopadhyay D. (2009). Estimating nursing intensity and direct cost using the nurse patient assignment, Journal of Nursing Administration, 39(6), 276-284.


• Chi AC, Appleton K, Henriod J, Krayer J, Marlow NM, Bandyopadhyay D, Sigmon R and Kurtz DT. (2009). Differential induction of CYP1A1 and CYP1B1 by Benzo[a]pyrene in oral squamous cell carcinoma cell lines and by tobacco in oral mucosa, Oral Oncology, 45(11), 980-985.


• DeSantis S, Bandyopadhyay D, Back SE and Brady KT. (2009). Non-treatment clinical studies of cocaine and methamphetamine users are protective against follow-up substance abuse, Drug and Alcohol Dependence, 105, 227-233.


• Yuen HK, *Wolf, BJ, Magruder KM, Bandyopadhyay D and London SD. (2009). Oral health knowledge and behavior among adults with diabetes, Diabetes Research and Clinical Practice, 86(3), 239-246.


• Bandyopadhyay D, Reich BJ and Slate E. (2009). Bayesian modeling of multivariate spatial binary data with applications to dental caries, Statistics in Medicine, 28(28), 3492-3508.


• Slate E and Bandyopadhyay D. (2009) An investigation of the MC-SIMEX method with application to measurement error in periodontal outcomes, Statistics in Medicine, 28(28), 3523-3538

 2008

• Bandyopadhyay D and Datta S (2008). Testing equality of survival distributions when the population marks are missing, Journal of Statistical Planning and Inference, 138(6), 1722-1732


• Subramanian S and Bandyopadhyay D (2008). Semiparametric models for left truncation and right censoring with missing censoring indicators, Statistics and Probability Letters, 78(16), 2572-2577

 2007

• Yuen HK, Gillespie MB, Barkley RA, Day TA, Bandyopadhyay D, Sharma AK (2007). Driving performance in patients with cancer in the head and neck region, Archives of Otolaryngology-Head and Neck Surgery, 133(9), 904-909.

 2006

• Berenhaut KS, *Foley JD and Bandyopadhyay D (2006). Maximization for inner products under quasi-monotone constraints, Journal of Inequalities in Pure and Applied Mathematics, 7(5), 1-10

 2005

• Chowdhury AS, Arabnia HR and Bandyopadhyay D (2005). Improved stereo correlation using Moravec operator and Kolmogorov-Smirnov test, Proceedings of the 2005 International Conference on Computer Vision (VISION, '05): June 20-23, 2005, Las Vegas, USA, 24-30


• Berenhaut KS and Bandyopadhyay D (2005). Monotone convex sequences and Cholesky decomposition of symmetric Toeplitz matrices, Linear Algebra and its Applications, 403(1), 75-85